Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015892065.1_cds_XP_016446956.1_41764
CDS Infomation

[gene=LOC107771994] [db_xref=GeneID:107771994] [protein=uncharacterized PKHD-type hydroxylase At1g22950-like] [partial=3'] [protein_id=XP_016446956.1] [location=join(7309..7593,8722..8769,9369..9545,9633..9783,9887..9973,10080..10204,10582..10700,11199..>11310)] [gbkey=CDS]
Sequence

ATGGATCAGAGAAGGGAGGCACAAGCTAACGAGATTAATGGGAGTCGGAGCAATGAAAAC
GACAGCGTTTCGTCGAAGGGGCCAGCGCTGCGGCTGTACCCATGTGTAGAGAAGAAGGCG
GAGAAGTATGAGGATTTAGAAGAAGAATTGGAGTTCAGCCCACATCTATACAGTGCTCTT
GAGCGGCATCTTCCGACCAGCGTCCTCAGTTCATCTCGAGACAACAAGGTCCAATACATG
ACTGATATTCTCCTCCGTTACTCTCCCCGCTCCGATCGCAGTCGCTTGCAGAAACATGGA
GAATACAGGCAGAAAATCATATCAAACTATCAGCCTCTACATAGGGTGTTATATACCATG
CACGCTGCAGATTTCTTTGTGCCTTCATTTATTAAGGCGATCAGTGAGAATACGGAGGAA
AGCTTCAGAAAAATAATGTCTGAAGCTTCTCCAGGTGTTTTTACATTTGAAATGCTTCAA
CCACGTTTTTGTGAGATGATGTTGGCTGAGGTACAAAACTTTGAGAAATGGGTTCGTGAA
ACAAAATTCAGAATCATGCGCCCCAATACTATGAACAAATTTGGATCCGTTCTTGATGAT
TTTGGCCTTCAAAACATGCTTCAGAAGTTTATGGAAGATTTTATACGCCCTATTTCAAGA
GTTTTTTTTACTGAAGTTGGTGGATCCACACTCGATGGTCATCATGGTTTTGTCGTTGAG
TATGGGACAGACAGAGACATTGACTTGGGTTTCCATGTTGATGATGCGGAGGTCACTTTG
AATGTGTGCTTAGGAAAGCAATTCACAGGTGGAGAGTTGTTCTTTCGAGGTGTGCGGTGC
GAGAAGCATGTGAATTCTGATACACAACCAGAGGAGATCTTTGATTATGCGCATATCGCG
GGGCGTGCAATTCTTCATTGTGGTCGCCATAGGCATGGTGCTAGAGCGACAACATCTGGG
CAGAGGATCAACTTGTTGATATGGTGCAGAAGCTCCGTTTTCAGAGAAATGAGGAAGTAC
CAAACAGATTTTCCTAGCTGGTGTGCAGAGTGCAAACGTGAGAAGGAAGAAAGGATACGG
CAGAAAGTTTCTACTCTCAAATCG

Peptide Sequence

PEP ID

XP_016446956.1
PEP Infomation

PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950-like, partial [Nicotiana tabacum]
Sequence

MDQRREAQANEINGSRSNENDSVSSKGPALRLYPCVEKKAEKYEDLEEELEFSPHLYSAL
ERHLPTSVLSSSRDNKVQYMTDILLRYSPRSDRSRLQKHGEYRQKIISNYQPLHRVLYTM
HAADFFVPSFIKAISENTEESFRKIMSEASPGVFTFEMLQPRFCEMMLAEVQNFEKWVRE
TKFRIMRPNTMNKFGSVLDDFGLQNMLQKFMEDFIRPISRVFFTEVGGSTLDGHHGFVVE
YGTDRDIDLGFHVDDAEVTLNVCLGKQFTGGELFFRGVRCEKHVNSDTQPEEIFDYAHIA
GRAILHCGRHRHGARATTSGQRINLLIWCRSSVFREMRKYQTDFPSWCAECKREKEERIR
QKVSTLKS

Transcript Sequence

Gene sequence data has not been registered.